Kara Fitzgerald
Bio

Lab Tests: stool
Conditions: gastrointestinal disorders

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Viva la Commensal Biofilm

Thursday, 23 July 2009 15:55 by Kara Fitzgerald   RSS Feed

Gastrointestinal biofilms are an important topic, and those comprised of pathogenic microbes are getting much well-deserved attention in the integrative medical community. However, in keeping with the sIgA topic, I want to give a shout-out to commensal biofilms, which are vital to GI health and deserve similar attention.

Biofilms are everywhere, allowing bacteria to survive- good or bad. They are found at the solid-liquid interface in most environments. Indeed, dental plaques are a biofilm, as is the slime on an icky bathtub. Biofilms are comprised of bacteria (and/or other microbes) and an extracellular matrix of excreted polymeric polysaccharides.

Simply put: bugs + goo = slime.

Slime is nothing to joke about! Biofilms allow pathogenic organisms to be antibiotic resistant, up to 1000-fold by one estimate. But biofilms comprised of commensals can be our friends, modulating our immune response, supporting GI integrity and reducing inflammation.

Research on commensal GI biofilm shows that E. coli , bifidobacteria and L. reuteri are apparently efficient producers, with the former mediated by sIgA and mucin. Research suggests commensal biofilms may be anti-inflammatory, modulate cytokine production and crowd out pathogenic biofilms.

One study in rats with human-type flora showed improved bifidobacteria biofilm, mucus thickness, villous height, crypt depth, and mucin-producing goblet cell numbers when supplemented with inulin-type fructans. How cool is that?

How can we tell if our GI commensal biofilm is healthy?

On the GIFx report, I would certainly be concerned if I didn’t see enough bifidobacteria, lactobacillus, commensal E. coli or sIgA. Glutamine and S. boulardii support sIgA production; whereas the inulin mentioned above, plus probiotic supplelentation will help facilitate commensal bacterial growth. Finally, treating inflammation and minimizing unwarranted antibiotic use should also benefit biofilm status.

I think we can say that biofilms are little ecosystems unto themselves, where the “sum is greater than the parts.” And when we’re thinking about protection of our all-important GI microbiota, the commensal biofilm is once slimy surface we don’t want to slip away!



Conditions:  
Lab Tests:   stool
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Comments

August 12. 2009 17:02

Buena D. Sapang

Indeed the Biofilm topic is now the flavor-of-the year topic. Evidences have come out that the cause/s of the many diseases we now encountering are because of environmental factors - environmental pollutants ( esp.toxic metals because of advanced industrialization); the bad bugs cling to these metals making the host immunologically compromised. Kindly discuss more in your website how to address the Biofilms of the bad bugs to help eradicate them.  

Buena D. Sapang Republic of the Philippines

August 18. 2009 14:36

hal

Hi there!,

What recommendations would you make to a patient reporting a low ecoli by the gut stool analysis?

thanks Smile

ps. the textbook is fantastic, bed time reading for this med student!

hal

September 25. 2009 16:46

kara fitzgerald

Thank you both for the comments.

Buena: I am posting a blog on treating pathogenic and dysbiotic biofilms.

Hal: Regarding low e coli: while there is some research on its efficacy as a probiotic, it's not generally found in formulas. I would recommend normalizing your microbiota the same way we'd suggest if your anerobes were low:

High fiber, whole foods diet; a good probiotic formula and a prebiotic supplement. Fermented foods are loaded with probios also.

You can retest in a few months (just the microbial portion of the GIFX and see if you've normalized your imbalances)

ttyl--
Kara

kara fitzgerald United States

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